92877-0  Human coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 & Parainfluenza virus 1+​2+​3+​4 RNA panel: -: Pt: Respiratory.upper: -: Probe.amp.tar  

PANEL HIERARCHY  (view this panel in the LForms viewer)

  LOINC#   LOINC Name R/O/C  Cardinality  Ex. UCUM Units 
  92877-0   Human coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 & Parainfluenza virus 1+​2+​3+​4 RNA panel: -: Pt: Respiratory.upper: -: Probe.amp.tar    
       92879-6   Human coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar    
       92884-6   Parainfluenza virus 1+​2+​3+​4 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar    
 

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel  Pt  Respiratory.upper  Probe.amp.tar
  Long Common Name:  Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection
  Short Name:  4 HCoVs + HPIV1-4 RNA Pnl Up resp NAA+pr
  Display Name:  HCoV 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel NAA+probe (Upper resp)

BASIC ATTRIBUTES
  Class/Type: PANEL.MICRO/Lab
  Panel Type: Panel
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Order
  Status: Active

MEMBER OF THESE EQUIVALENCE GROUPS
  LG32771-4  Human coronavirus

PARTS

Part Type    Part No.  Part Name   
Component   LP344992-5  Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel   [Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP208441-8  Respiratory.upper   [Upper respiratory specimen] 
Scale   LP7747-1 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP20740-4 
Fragments for synonyms   LP21059-8  Panel 
Fragments for synonyms   LP21265-1 
Fragments for synonyms   LP21267-7 
Fragments for synonyms   LP28602-8  Parainfluenza 
Fragments for synonyms   LP35032-9  Upper 

RELATED NAMES
  3 Self-Sustaining Sequence Replication II PI1
  3SR SR III Pnl
  4 HCoVs + HPIV1-4 RNA Pnl LAT Point in time
  Amplif LCR Polymerase chain reaction
  Amplification Ligase chain reaction Probe amp
  Amplified Ligation-activated transcription Probe with ampification
  Corona virus Microbiology Probe with target amplification
  DNA NUCLEIC ACID PROBE NAA+probe QBR
  DNA probe NAAT Random
  HCoV NASBA Ribonucleic acid
  HCoV 229E Nucleic acid sequence based analysis SDA
  HCoV 229E+HKU1+NL63+OC43 Pan Strand Displacement Amplification
  HPIV PANEL.MICROBIOLOGY TMA
  HPIV 1+2+3+4 Panl Transcription mediated amplification
  HPIV 1+2+3+4 RNA Para Up
  HPIV1 Parainflu Up resp
  HPIV1+2+3 Parainfluenza type 1  
  Human respirovirus 1 Parainfluenza type I  
  i PCR  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/26/2019 11:53:39 AM
  Long Common Name: Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection
  Shortname: 4 HCoVs + HPIV1-4 RNA Pnl Up resp NAA+pr
  Fully Specified Name: Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel: -: Pt: Respiratory.upper: -: Probe.amp.tar
     
  Component Word Count: 14
  ID: 100457
  # of Panel Elements: 3
  Status (Raw): ACTIVE



Selected information about each LOINC that is part of this panel



92879-6   Human coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar  

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Human coronavirus 229E+HKU1+NL63+OC43 RNA  PrThr  Pt  Respiratory.upper  Ord  Probe.amp.tar
  Long Common Name:  Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detection
  Short Name:  4 HCoVs RNA Up resp Ql NAA+probe
  Display Name:  HCoV 229E+HKU1+NL63+OC43 RNA NAA+probe Ql (Upper resp)

PART DEFINITION/DESCRIPTION(S)
  Part: Human coronavirus 229E+HKU1+NL63+OC43 RNA
  Coronaviruses are positive-sense, single-stranded RNA viruses. The envelope of the virus has glycoprotein spikes that give it a crown-like appearance. There are six strains of coronavirus within two subgroups that infect humans. The strains of human coronaviruses that commonly infect people worldwide include 229E and NL63 in the Alpha subgroup and OC43 and HKU1 in the Beta subgroup. These viruses most often cause common cold symptoms, but can also lead to pneumonia. Severe acute respiratory syndrome coronavirus (SARS-CoV) and the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) are less common but cause more severe illness.[https://www.cdc.gov/coronavirus/types.html][https://academic.oup.com/cid/article/37/7/929/422314]
 
 

BASIC ATTRIBUTES
  Class/Type: MICRO/Lab
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Both
  Status: Active

EXAMPLE ANSWER LIST    (LL2021-5)  
 
Source: Gen-Probe
  SEQ#        Answer        Answer ID    
  1       Positive
http://snomed.info/sct ©: 10828004 Positive (qualifier value)    
  LA6576-8  
  2       Negative
http://snomed.info/sct ©: 260385009 Negative (qualifier value)    
  LA6577-6  
  3       Invalid       LA15841-2  

MEMBER OF THESE PANELS     
  This section provides information about panels that contain this LOINC code.
  LOINC   Long Common Name  
  92877-0 Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection
  

MEMBER OF THESE EQUIVALENCE GROUPS
  LG50873-5  Human coronavirus 229E+HKU1+NL63+OC43 RNA|PrThr|Sys:ANYResp
  LG32771-4  Human coronavirus

PARTS

Part Type    Part No.  Part Name   
Component   LP263694-4  Human coronavirus 229E+HKU1+NL63+OC43 RNA 
Component   LP263700-9  Human coronavirus 229E+HKU1+NL63+OC43 
     Suffix   LP32423-3  RNA 
Property   LP217195-9  PrThr   [Presence or Threshold] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP208441-8  Respiratory.upper   [Upper respiratory specimen] 
Scale   LP7751-3  Ord 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP35032-9  Upper 

LANGUAGE VARIANTS
  Chinese (CHINA)  (From: Regenstrief-generated full translation based on part translation provided by Lin Zhang, A LOINC volunteer from China)
 
  人类冠状病毒 229E+​HKU1+​NL63+​OC43 RNA:存在情况或阈值:时间点:呼吸道.上:序数型:探针法.基因扩增.靶向人类冠状病毒 229E+​HKU1+​NL63+​OC43 RNA:存在情况或阈值:时间点:呼吸道.上:序数型:探针法.基因扩增.靶向
  Italian (ITALY)  (From: Regenstrief-generated full translation based on part translation provided by Consiglio Nazionale delle Ricerche)
 
  Coronavirus umano 229E+​HKU1+​NL63+​OC43 , RNA:PrThr:Pt:Sistema respiratorio.superiore:Ord:Sonda.amp.tarCoronavirus umano 229E+​HKU1+​NL63+​OC43 , RNA:PrThr:Pt:Sistema respiratorio.superiore:Ord:Sonda.amp.tar
  Spanish (SPAIN)  (From: Regenstrief-generated full translation based on part translation provided by the Clinical Laboratory Committee of SERVICIO EXTREMEÑO DE SALUD, with the support of BITAC MAP.)
 
  Coronavirus Humano 229E+​HKU1+​NL63+​OC43 RNA:PrThr:Punto temporal:Muestra respiratoria de vías altas:Ord:Sonda con amplificación dirigidaCoronavirus Humano 229E+​HKU1+​NL63+​OC43 RNA:PrThr:Punto temporal:Muestra respiratoria de vías altas:Ord:Sonda con amplificación dirigida

RELATED NAMES
  3 Self-Sustaining Sequence Replication Ligation-activated transcription QL
  3SR SR Microbiology Qual
  Amplif NAA+probe Qualitative
  Amplification NAAT Random
  Amplified NASBA Ribonucleic acid
  Corona virus Nucleic acid sequence based analysis Screen
  CoV 229E+HKU1+NL63+OC43 Ordinal SDA
  DNA NUCLEIC ACID PROBE PCR Strand Displacement Amplification
  DNA probe Point in time TMA
  HCoV Polymerase chain reaction Transcription mediated amplification
  HCoV 229E PR Up
  HCoV 229E+HKU1+NL63+OC43 Probe amp Up resp
  LAT Probe with ampification  
  LCR Probe with target amplification  
  Ligase chain reaction QBR  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/26/2019 11:53:39 AM
  Long Common Name: Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detection
  Shortname: 4 HCoVs RNA Up resp Ql NAA+probe
  Fully Specified Name: Human coronavirus 229E+HKU1+NL63+OC43 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar
     
  Component Word Count: 7
  ID: 100459
  Status (Raw): ACTIVE


92884-6   Parainfluenza virus 1+​2+​3+​4 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA [Presence] in Upper respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar  

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Parainfluenza virus 1+2+3+4 RNA  PrThr  Pt  Respiratory.upper  Ord  Probe.amp.tar
  Long Common Name:  Parainfluenza virus 1+2+3+4 RNA [Presence] in Upper respiratory specimen by NAA with probe detection
  Short Name:  HPIV 1+2+3+4 RNA Up resp Ql NAA+probe
  Display Name:  Parainfluenza virus 1+2+3+4 RNA NAA+probe Ql (Upper resp)

BASIC ATTRIBUTES
  Class/Type: MICRO/Lab
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Both
  Status: Active

EXAMPLE ANSWER LIST    (LL2021-5)  
 
Source: Gen-Probe
  SEQ#        Answer        Answer ID    
  1       Positive
http://snomed.info/sct ©: 10828004 Positive (qualifier value)    
  LA6576-8  
  2       Negative
http://snomed.info/sct ©: 260385009 Negative (qualifier value)    
  LA6577-6  
  3       Invalid       LA15841-2  

MEMBER OF THESE PANELS     
  This section provides information about panels that contain this LOINC code.
  LOINC   Long Common Name  
  92877-0 Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection
  

MEMBER OF THESE EQUIVALENCE GROUPS
  LG50887-5  Parainfluenza virus 1+2+3+4 RNA|PrThr|Sys:ANYResp

PARTS

Part Type    Part No.  Part Name   
Component   LP145690-6  Parainfluenza virus 1+2+3+4 
Component   LP266321-1  Parainfluenza virus 1+2+3+4 RNA 
     Suffix   LP32423-3  RNA 
Property   LP217195-9  PrThr   [Presence or Threshold] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP208441-8  Respiratory.upper   [Upper respiratory specimen] 
Scale   LP7751-3  Ord 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP20740-4 
Fragments for synonyms   LP21265-1 
Fragments for synonyms   LP21267-7 
Fragments for synonyms   LP28602-8  Parainfluenza 
Fragments for synonyms   LP35032-9  Upper 

LANGUAGE VARIANTS
  Chinese (CHINA)  (From: Regenstrief-generated full translation based on part translation provided by Lin Zhang, A LOINC volunteer from China)
 
  副流感病毒 1+​2+​3+​4 型 RNA:存在情况或阈值:时间点:呼吸道.上:序数型:探针法.基因扩增.靶向副流感病毒 1+​2+​3+​4 型 RNA:存在情况或阈值:时间点:呼吸道.上:序数型:探针法.基因扩增.靶向
  Italian (ITALY)  (From: Regenstrief-generated full translation based on part translation provided by Consiglio Nazionale delle Ricerche)
 
  Parainfluenza virus 1+​2+​3+​4 , RNA:PrThr:Pt:Sistema respiratorio.superiore:Ord:Sonda.amp.tarParainfluenza virus 1+​2+​3+​4 , RNA:PrThr:Pt:Sistema respiratorio.superiore:Ord:Sonda.amp.tar
  Spanish (SPAIN)  (From: Regenstrief-generated full translation based on part translation provided by the Clinical Laboratory Committee of SERVICIO EXTREMEÑO DE SALUD, with the support of BITAC MAP.)
 
  Parainfluenza virus 1+​2+​3+​4 RNA:PrThr:Punto temporal:Muestra respiratoria de vías altas:Ord:Sonda con amplificación dirigidaParainfluenza virus 1+​2+​3+​4 RNA:PrThr:Punto temporal:Muestra respiratoria de vías altas:Ord:Sonda con amplificación dirigida

RELATED NAMES
  3 Self-Sustaining Sequence Replication Ligase chain reaction Probe with ampification
  3SR SR Ligation-activated transcription Probe with target amplification
  Amplif Microbiology QBR
  Amplification NAA+probe QL
  Amplified NAAT Qual
  DNA NUCLEIC ACID PROBE NASBA Qualitative
  DNA probe Nucleic acid sequence based analysis Random
  HPIV Ordinal Ribonucleic acid
  HPIV 1+2+3+4 Para Screen
  HPIV 1+2+3+4 RNA Parainflu SDA
  HPIV1 Parainfluenza type 1 Strand Displacement Amplification
  HPIV1+2+3 Parainfluenza type I TMA
  Human respirovirus 1 PCR Transcription mediated amplification
  i PI1 Up
  II Point in time Up resp
  III Polymerase chain reaction  
  LAT PR  
  LCR Probe amp  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/26/2019 11:53:40 AM
  Long Common Name: Parainfluenza virus 1+2+3+4 RNA [Presence] in Upper respiratory specimen by NAA with probe detection
  Shortname: HPIV 1+2+3+4 RNA Up resp Ql NAA+probe
  Fully Specified Name: Parainfluenza virus 1+2+3+4 RNA: PrThr: Pt: Respiratory.upper: Ord: Probe.amp.tar
     
  Component Word Count: 7
  ID: 100464
  Status (Raw): ACTIVE

3rd PARTY COPYRIGHT
  Code System: http://snomed.info/sct
  This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

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